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Image Search Results
Journal: Frontiers in Microbiology
Article Title: Circulation of Shiga Toxin-Producing Escherichia coli Phylogenetic Group B1 Strains Between Calve Stable Manure and Pasture Land With Grazing Heifers
doi: 10.3389/fmicb.2020.01355
Figure Lengend Snippet: Identities and presence of virulence genes in Shiga toxin-producing Escherichia coli (STECs) isolated from different ecosystems over 2 years from the Nijkerk cattle farm.
Article Snippet: The observed inconsistence in “stoichiometry” between the screened virulence genes was obvious in grass shoot and rhizosphere soil DNA extracts, and this may be related to the relatively higher selectivity of the
Techniques: Isolation
Journal: Frontiers in Microbiology
Article Title: Circulation of Shiga Toxin-Producing Escherichia coli Phylogenetic Group B1 Strains Between Calve Stable Manure and Pasture Land With Grazing Heifers
doi: 10.3389/fmicb.2020.01355
Figure Lengend Snippet: Maximum likelihood phylogenetic comparison of 35 STECs from different ecosystems on the Nijkerk cattle farm and 15 E. coli / Escherichia fergusonii strains. The tree was rooted using E. fergusonii (ATCC35469) as outgroup. Phylogenetic relationships between E. coli strains were inferred by making use of 10 concatenated household genes ( adk , fum C, glp K, gyr B, icd , lys A, mdh , met G, pur A, and rec A) with 1,000 bootstrap iterations. Relevant phylogenetic groups (A, B1, B2, D, E, and F) are indicated in the tree. Reference strain abbreviations: HS, O9:H4 strain HS; K12, O16:H48 K12 strain MG1655; O104, O104:H4 strain 2011C-3493; 55989, O104:H4 strain 55989; O103, O103:H2 strain 12009; SE11, O173:H4 strain SE11; O26, O26:H11 strain 11368; O111, O111:H8 strain 11128; IAI1, O8:H9 strain IAI1; SE15, O150:H5 strain SE15; UT189, O18:H7 strain UT189; UMNO26, O17:H18 strain UMN026; O157, O157:H7 Sakai strain; IAI39, O7:H45 strain IAI39; E. fergusonii , E. fergusonii ATCC35469.
Article Snippet: The observed inconsistence in “stoichiometry” between the screened virulence genes was obvious in grass shoot and rhizosphere soil DNA extracts, and this may be related to the relatively higher selectivity of the
Techniques: